Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015887671.1_cds_XP_016442098.1_37395
CDS Infomation

[gene=LOC107767573] [db_xref=GeneID:107767573] [protein=geranylgeranyl pyrophosphate synthase, chloroplastic-like] [protein_id=XP_016442098.1] [location=58781..59872] [gbkey=CDS]
Sequence

ATGAGTCTTTCTACAGCAATTACAACATGGGGCAACACCTATTTTGCCCTTGGAAATAAC
GGCAGATCCAGATTTTACTCTCATGGATTCTTACCTACTCATCTGAAGATCAAATTCTCC
ACCAACAACCCTTCCCCGCTTTCTGTCTCAGCTCTTCTTACAACAAAACAACAAACTGAT
GAAAGCAAGAACAAGAAAAAACAAGCAATGGAGTTCAATGATTACGTTCTTGAAAAAGCT
AATTCTGTGAACAGGGCTTTGGAATCTTCAGTCTTGATTAAGGAACCAGTCAAGATTCAT
GAATCCATGAGATATTCTCTTCTTGCTGGTGGGAAAAGAATCCGACCCATGTTGTGTATA
GCCTCTTGTGAACTTGTTGGTGGAGATGAATCCATAGCTATGCCTGCAGCTTGTGCTGTT
GAGATGATTCATACCATGTCTTTAATTCATGACGATCTTCCTTGTATGGATAATGATGAT
CTTAGAAGAGGGAAGCCTACAAATCACAAGATTTATGGTGAGGATGTAGCTGTTTTAGCA
GGGGATGCACTTCTTGCATTGGCTTTTGAGCACATTGCTACTCGAACAAAAGGGGTTCCT
TCACATAGGATTGTGAGGGTGGTTGGTGAGTTAGCTAAGTGTATTGGTGCAGAGGGACTT
GTAGCTGGACAAGTTGTAGATATAATTTCAGAGGGGGTTTCTGATGTTGATTTGAAGCAT
TTAGAGTTCATTCATTTGCACAAGACTGCAGCTTTATTAGAAGGGTCAGTGGTGTTAGGG
GCTATATTAGGAGGGGCAGATGATGAAGAAGTGGAAAAATTAAGGAAGTTTGCAAGATGT
ATTGGGTTGTTATTTCAGGTTGTGGATGATATTCTTGATGTTACAAAGTCTTCTCAACAA
TTGGGGAAAACCGCAGGAAAGGACTTAGTTGCTGATAAGGTAACTTATCCCAAACTGATT
GGTATTGACAAGTCAAGGGAGTTCGCTGAGGAGTTAAACAAAGAGGCTCAAGCTCAGCTT
GCTGGATTTGATCAAGAGAAAGCAGCTCCTTTGATTGCTTTAGCAAATTATATTGCTTAT
AGAGAGAATTAA

Peptide Sequence

PEP ID

XP_016442098.1
PEP Infomation

PREDICTED: geranylgeranyl pyrophosphate synthase, chloroplastic-like [Nicotiana tabacum]
Sequence

MSLSTAITTWGNTYFALGNNGRSRFYSHGFLPTHLKIKFSTNNPSPLSVSALLTTKQQTD
ESKNKKKQAMEFNDYVLEKANSVNRALESSVLIKEPVKIHESMRYSLLAGGKRIRPMLCI
ASCELVGGDESIAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKIYGEDVAVLA
GDALLALAFEHIATRTKGVPSHRIVRVVGELAKCIGAEGLVAGQVVDIISEGVSDVDLKH
LEFIHLHKTAALLEGSVVLGAILGGADDEEVEKLRKFARCIGLLFQVVDDILDVTKSSQQ
LGKTAGKDLVADKVTYPKLIGIDKSREFAEELNKEAQAQLAGFDQEKAAPLIALANYIAY
REN

Transcript Sequence

Gene sequence data has not been registered.